Exact settings maybe tricky and may not be applicable to all situations. Since different guitars, amps, and added gear can alter the final sound, I suggest that you just use your ear to find the best settings that work for your genre.

Here's a sample of a very simple chain:

GUITAR => 3) Classic Dist    => Tube OD => MID-EQ  => Reverb

                  2) Classic Dist    => Tube OD => MID-EQ  => Tremolo
                  1) Parametric EQ => Tube OD =>  MID-EQ => Delay

1 being the stomps nearest to the floorboard.

3 = greatly boosted levels, more distorted

2 = slightly boosted levels

1 = cleanish settings

What I do is set to default all clean and tame sounds in chain 1. Such that if I will need to boost the "MID-EQ" channel, I hit MID-EQ (1) on, or MID-EQ (2) if I need more of a specific frequency, or better yet, if I like the boost more in the upper frequency registers, MID-EQ-3.

The same concept is used for the distotions, the parametric serves my clean settings, the DIST (2) provides the verse distortions, and the edgier ones will use DIST (3). The EQs serve their purposes for solos, fills and other accents - it's a mix and match from there. But because there is a logical positioning of settings (and I use this across all scenes even in latch mode) I can mix match with full confidence of the type of sound I'll get with every stomp. In a way, what I get is a versatile combination of roughly the same sound, and practically the same pedalboard without tweaking as much - but all without much tap dancing. I also play alot with the volume and tone knob while playing, as well as hook the exp1 to one group of pedals... but that's another post.

You can download my M13 settings file on my website, along with some sysex files from other members shared: http://sites.google.com/site/parirami/file-cabinet