UPDATE:
I feel like I'm getting closer to the tone I want the more I work at it, but still not there yet. Recently, I learned that one of the more major things that was ruining my tone was something I myself was doing subconsciously. When I would go to use the "Amplify" function in Audacity, I would have the "Allow Clipping" box checked. When I unchecked it, it sounded much, much better.
What I've realized is that the tone I'm looking for for my recordings is something of a cross between this punky one:
...and this metal one:
http://www.youtube.com/watch?v=SSX86zPnUkY
I've done some research and found out that both guitarists (Eric Melvin and John Petrucci use Mesa Boogie amps). The Cali Diamond Plate amp in the Metal Shop pack I have for the Guitarport is based on Mesa Boogie amps, so I'm trying to work with that. Any more tips you guys could give me in regards to the EQ level, effects or anything like that? Remember that I am using Gearbox here and do not have POD farm or RiffWorks. Thanks.
- David