Look, I love the Helix, but this would definitely count as a usability issue. It's unusable for two reasons:
Why would you want the fuzz to change the whole chain's input impedance when bypassed? In the analog domain, pedals with true bypass were considered a big improvement because they eliminated loading like this (typically called "tone suck"). In this case, it means that having that fuzz in the chain (in it's typical first position placement) at all is not really usable if you want to ever bypass it, because it so dramatically changes the sound of the rest of the patch when present (unless going through a pretty crazy workaround). Yes, it makes sense to have the input Z change when the fuzz is on for better fuzz performance, but when off? Makes no sense to me.
I can't imagine that a typical user would have any idea what's going on, and why the sound is all messed up in this case. I only was even able to guess at the input impedance issue (which is something that is probably not even in the vocabulary of many guitarists) because I've spent a long time working on circuits, and have experienced issues like this before. I don't think the input Z behavior is even documented anywhere (which, to be honest, wouldn't help with most users, anyway).